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  5. GRMZM2G055437

GRMZM2G055437


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_42_0000437 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G055437
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
At1g48870 No alias Transducin/WD40 repeat-like superfamily protein... 0.03 Orthogroups_2024-Update
Bradi1g77510 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi5g18647 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G375856 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os04g44700 No alias WD-40 repeat family protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.007G110500 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.011G122500 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s219_28V6 No alias MJK13.13; WD-40 repeat family protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Sopen10g002800 No alias WD domain, G-beta repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Predicted GO
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 247 279
IPR001680 WD40_repeat 373 409
IPR001680 WD40_repeat 331 367
No external refs found!