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  5. Solyc03g026080

Solyc03g026080


Description : Rhomboid-like protein (AHRD V3.3 *** K4BF81_SOLLC)


Gene families : OG_42_0000533 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000533_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g026080
Cluster HCCA clusters: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
Bradi1g77450 No alias RHOMBOID-like 2 0.03 Orthogroups_2024-Update
Glyma.07G132800 No alias RHOMBOID-like 1 0.05 Orthogroups_2024-Update
HORVU1Hr1G048610.3 No alias protease *(RBL) 0.02 Orthogroups_2024-Update
LOC_Os04g48130 No alias OsRhmbd11 - Putative Rhomboid homologue, expressed 0.02 Orthogroups_2024-Update
Mp6g05540.1 No alias protease (RBL) 0.02 Orthogroups_2024-Update
Sobic.001G321800.1 No alias protease *(RBL) 0.03 Orthogroups_2024-Update
Sobic.001G532200.1 No alias protease *(RBL) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003713 transcription coactivator activity IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 101 243
No external refs found!