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At1g50590


Description : Pirin-like protein At1g50590 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS9]


Gene families : OG_42_0001449 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001449_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g50590
Cluster HCCA clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Brara.D00215.1 No alias transcriptional co-regulator *(Pirin) 0.03 Orthogroups_2024-Update
Potri.002G231900 No alias RmlC-like cupins superfamily protein 0.04 Orthogroups_2024-Update
Solyc07g065160 No alias Calcium-binding EF hand family protein (AHRD V3.3 --*... 0.05 Orthogroups_2024-Update
evm.model.contig_682.4 No alias (at3g59260 : 109.0) pirin, putative; CONTAINS InterPro... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003829 Pirin_N_dom 33 129
IPR008778 Pirin_C_dom 182 292
No external refs found!