GRMZM2G326066

Description : Ribosomal L27e protein family

Gene families : OG_42_0001324 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001324_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G326066
Cluster	HCCA clusters: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method
166700	No alias	Ribosomal L27e protein family	0.09	Orthogroups_2024-Update
A4A49_05318	No alias	60s ribosomal protein l27	0.07	Orthogroups_2024-Update
A4A49_21973	No alias	60s ribosomal protein l27	0.02	Orthogroups_2024-Update
At2g32220	No alias	60S ribosomal protein L27-1...	0.05	Orthogroups_2024-Update
At3g22230	No alias	60S ribosomal protein L27-2...	0.03	Orthogroups_2024-Update
At4g15000	No alias	60S ribosomal protein L27 [Source:UniProtKB/TrEMBL;Acc:Q0WRB8]	0.05	Orthogroups_2024-Update
Brara.A02020.1	No alias	component *(eL27) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
Brara.A02735.1	No alias	component *(eL27) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Brara.C03864.1	No alias	component *(eL27) of large ribosomal-subunit (LSU) proteome	0.14	Orthogroups_2024-Update
Brara.E01420.1	No alias	component *(eL27) of large ribosomal-subunit (LSU) proteome	0.11	Orthogroups_2024-Update
Brara.E02021.1	No alias	component *(eL27) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Brara.H00790.1	No alias	component *(eL27) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Cre17.g701650	No alias	Ribosomal L27e protein family	0.1	Orthogroups_2024-Update
Glyma.05G132800	No alias	Ribosomal L27e protein family	0.03	Orthogroups_2024-Update
Glyma.15G158400	No alias	Ribosomal L27e protein family	0.05	Orthogroups_2024-Update
HORVU7Hr1G063280.1	No alias	component *(eL27) of large ribosomal-subunit (LSU) proteome	0.1	Orthogroups_2024-Update
Kfl00071_0270	kfl00071_0270_v1.1	(q05462\|rl27_pea : 209.0) 60S ribosomal protein L27 -...	0.05	Orthogroups_2024-Update
MA_3390g0010	No alias	(at3g22230 : 216.0) Ribosomal L27e protein family;...	0.03	Orthogroups_2024-Update
PSME_00015628-RA	No alias	(at3g22230 : 220.0) Ribosomal L27e protein family;...	0.06	Orthogroups_2024-Update
Pp1s101_74V6	No alias	ribosomal protein	0.06	Orthogroups_2024-Update
Pp1s221_49V6	No alias	ribosomal protein	0.12	Orthogroups_2024-Update
Pp1s83_116V6	No alias	60S ribosomal protein L27 [Pisum sativum]	0.09	Orthogroups_2024-Update
Seita.4G160400.1	No alias	component *(eL27) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
Sobic.006G221200.1	No alias	component *(eL27) of large ribosomal-subunit (LSU) proteome	0.14	Orthogroups_2024-Update
Sobic.010G230700.1	No alias	component *(eL27) of large ribosomal-subunit (LSU) proteome	0.12	Orthogroups_2024-Update
Solyc06g073300	No alias	60S ribosomal protein L27 (AHRD V3.3 *** A0A0V0HNB9_SOLCH)	0.11	Orthogroups_2024-Update
Solyc07g043360	No alias	60S ribosomal protein L27 (AHRD V3.3 *** K4CEJ5_SOLLC)	0.04	Orthogroups_2024-Update
Sopen06g029660	No alias	Ribosomal L27e protein family	0.13	Orthogroups_2024-Update
Sopen07g022920	No alias	Ribosomal L27e protein family	0.11	Orthogroups_2024-Update
evm.model.contig_2045.6	No alias	(p41101\|rl27_soltu : 144.0) 60S ribosomal protein L27 -...	0.14	Orthogroups_2024-Update
evm.model.tig00021275.23	No alias	(at3g22230 : 163.0) Ribosomal L27e protein family;...	0.09	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan predictions
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	IEP	Predicted GO
CC	GO:0000178	exosome (RNase complex)	IEP	Predicted GO
BP	GO:0001522	pseudouridine synthesis	IEP	Predicted GO
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEP	Predicted GO
MF	GO:0004519	endonuclease activity	IEP	Predicted GO
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Predicted GO
MF	GO:0004579	dolichyl-diphosphooligosaccharide-protein glycotransferase activity	IEP	Predicted GO
MF	GO:0004635	phosphoribosyl-AMP cyclohydrolase activity	IEP	Predicted GO
BP	GO:0006302	double-strand break repair	IEP	Predicted GO
BP	GO:0006325	chromatin organization	IEP	Predicted GO
BP	GO:0006334	nucleosome assembly	IEP	Predicted GO
BP	GO:0006471	protein ADP-ribosylation	IEP	Predicted GO
BP	GO:0006547	histidine metabolic process	IEP	Predicted GO
BP	GO:0006743	ubiquinone metabolic process	IEP	Predicted GO
BP	GO:0006744	ubiquinone biosynthetic process	IEP	Predicted GO
BP	GO:0009451	RNA modification	IEP	Predicted GO
MF	GO:0016763	transferase activity, transferring pentosyl groups	IEP	Predicted GO
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Predicted GO
MF	GO:0019238	cyclohydrolase activity	IEP	Predicted GO
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Predicted GO
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Predicted GO
BP	GO:0034728	nucleosome organization	IEP	Predicted GO
BP	GO:0042180	cellular ketone metabolic process	IEP	Predicted GO
BP	GO:0042181	ketone biosynthetic process	IEP	Predicted GO
BP	GO:0042254	ribosome biogenesis	IEP	Predicted GO
BP	GO:0044085	cellular component biogenesis	IEP	Predicted GO
BP	GO:0052803	imidazole-containing compound metabolic process	IEP	Predicted GO
BP	GO:0065003	protein-containing complex assembly	IEP	Predicted GO
BP	GO:0065004	protein-DNA complex assembly	IEP	Predicted GO
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Predicted GO
BP	GO:0071840	cellular component organization or biogenesis	IEP	Predicted GO
BP	GO:1901661	quinone metabolic process	IEP	Predicted GO
BP	GO:1901663	quinone biosynthetic process	IEP	Predicted GO
CC	GO:1905354	exoribonuclease complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001141	Ribosomal_L27e	52	137
IPR005824	KOW	7	35

External Links

No external refs found!

GRMZM2G326066

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation