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GRMZM2G347402


Description : Argonaute family protein


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G347402
Cluster HCCA clusters: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Kfl00085_0250 kfl00085_0250_v1.... (at1g48410 : 963.0) Encodes an RNA Slicer that... 0.02 Orthogroups_2024-Update
Kfl00480_0020 kfl00480_0020_v1.... (at1g48410 : 621.0) Encodes an RNA Slicer that... 0.02 Orthogroups_2024-Update
Mp8g08610.1 No alias siRNA-integrating factor (AGO) 0.02 Orthogroups_2024-Update
Solyc02g069270 No alias Argonaute 2b 0.03 Orthogroups_2024-Update
evm.model.tig00020961.9 No alias (at1g48410 : 115.0) Encodes an RNA Slicer that... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
InterPro domains Description Start Stop
IPR032473 Argonaute_Mid_dom 446 525
IPR014811 ArgoL1 202 249
IPR032474 Argonaute_N 32 190
IPR032472 ArgoL2 392 436
IPR003165 Piwi 536 646
IPR003100 PAZ_dom 256 381
No external refs found!