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  5. At1g56170

At1g56170


Description : Nuclear transcription factor Y subunit C-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LCG7]


Gene families : OG_42_0000527 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000527_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g56170
Cluster HCCA clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
A4A49_25259 No alias nuclear transcription factor y subunit c-9 0.03 Orthogroups_2024-Update
HORVU6Hr1G032200.3 No alias component *(NF-YC) of NF-Y transcription factor complex 0.03 Orthogroups_2024-Update
PSME_00019344-RA No alias "(at3g48590 : 200.0) Encodes a protein with similarity... 0.03 Orthogroups_2024-Update
Potri.005G094900 No alias nuclear factor Y, subunit C2 0.03 Orthogroups_2024-Update
Potri.007G070900 No alias nuclear factor Y, subunit C2 0.03 Orthogroups_2024-Update
Potri.013G025000 No alias nuclear factor Y, subunit C9 0.03 Orthogroups_2024-Update
Sobic.001G435500.1 No alias component *(NF-YC) of NF-Y transcription factor complex 0.03 Orthogroups_2024-Update
Sopen01g031630 No alias Histone-like transcription factor (CBF/NF-Y) and archaeal histone 0.03 Orthogroups_2024-Update
Sopen03g030050 No alias Histone-like transcription factor (CBF/NF-Y) and archaeal histone 0.02 Orthogroups_2024-Update
evm.model.contig_2154.13 No alias "(at1g08970 : 179.0) heme activated protein (HAP5c);... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 76 139
No external refs found!