1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.B00043.1

Brara.B00043.1


Description : Unknown function


Gene families : OG_42_0000537 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000537_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00043.1
Cluster HCAA Clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
A4A49_17748 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At2g32150 No alias At2g32150/F22D22.10 [Source:UniProtKB/TrEMBL;Acc:Q9SKY5] 0.04 Orthogroups_2024-Update
At5g02230 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily... 0.04 Orthogroups_2024-Update
At5g59480 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily... 0.05 Orthogroups_2024-Update
Bradi1g66710 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.05 Orthogroups_2024-Update
Bradi2g62150 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G151992 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G179432 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.10G139400 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.01 Orthogroups_2024-Update
Glyma.19G222500 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os07g44060 No alias haloacid dehalogenase-like hydrolase family protein,... 0.03 Orthogroups_2024-Update
Potri.006G086900 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.03 Orthogroups_2024-Update
Seita.2G403900.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.9G127000.1 No alias xanthosine monophosphate phosphatase *(XMPP) 0.03 Orthogroups_2024-Update
Seita.9G453700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G422100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G388400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc09g010940 No alias Haloacid dehalogenase-like hydrolase (AHRD V3.3 *** I3S857_MEDTR) 0.05 Orthogroups_2024-Update
Sopen09g005660 No alias Haloacid dehalogenase-like hydrolase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!