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  5. Brara.B01513.1

Brara.B01513.1


Description : regulatory protein *(RAR1) of effector-triggered immunity


Gene families : OG_42_0007495 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007495_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B01513.1
Cluster HCAA Clusters: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
Bradi1g75162 No alias protein binding;zinc ion binding 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007051 CHORD_dom 184 244
IPR007051 CHORD_dom 10 69
No external refs found!