1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.B02348.1

Brara.B02348.1


Description : component *(PsbR) of PS-II complex


Gene families : OG_42_0002845 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002845_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B02348.1
Cluster HCAA Clusters: Cluster_258

Target Alias Description ECC score Gene Family Method Actions
A4A49_20557 No alias photosystem ii 10 kda polypeptide, chloroplastic 0.03 Orthogroups_2024-Update
Bradi3g17640 No alias photosystem II subunit R 0.03 Orthogroups_2024-Update
Glyma.15G253700 No alias photosystem II subunit R 0.05 Orthogroups_2024-Update
LOC_Os07g05365 No alias photosystem II 10 kDa polypeptide, chloroplast... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA 16Dec
CC GO:0009654 photosystem II oxygen evolving complex IEA 16Dec
BP GO:0015979 photosynthesis IEA 16Dec
CC GO:0042651 thylakoid membrane IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
BP GO:0007265 Ras protein signal transduction IEP Predicted GO
BP GO:0007266 Rho protein signal transduction IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006814 PSII_PsbR 40 137
No external refs found!