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  5. Brara.B02773.1

Brara.B02773.1


Description : GARP subgroup GLK transcription factor


Gene families : OG_42_0003250 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B02773.1
Cluster HCAA Clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
A4A49_04028 No alias transcription activator glk1 0.03 Orthogroups_2024-Update
At5g44190 No alias Transcription activator GLK2... 0.03 Orthogroups_2024-Update
GRMZM2G026833 No alias GOLDEN2-like 2 0.04 Orthogroups_2024-Update
Glyma.12G117700 No alias GBF\'s pro-rich region-interacting factor 1 0.03 Orthogroups_2024-Update
Glyma.13G294300 No alias GBF\'s pro-rich region-interacting factor 1 0.04 Orthogroups_2024-Update
HORVU0Hr1G010940.1 No alias GARP subgroup GLK transcription factor 0.02 Orthogroups_2024-Update
HORVU3Hr1G032440.2 No alias GARP subgroup GLK transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G083690.3 No alias GARP subgroup GLK transcription factor 0.02 Orthogroups_2024-Update
LOC_Os06g24070 No alias myb-like DNA-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
Potri.007G136900 No alias GBF\'s pro-rich region-interacting factor 1 0.04 Orthogroups_2024-Update
Potri.T098900 No alias GBF\'s pro-rich region-interacting factor 1 0.05 Orthogroups_2024-Update
Pp1s31_317V6 No alias Golden 2-like protein 2 0.02 Orthogroups_2024-Update
Solyc10g008160 No alias Two-component response regulator-like APRR2 (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen10g004030 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 143 192
No external refs found!