Description : subgroup ERF-VIII transcription factor
Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.B02774.1 | |
Cluster | HCAA Clusters: Cluster_57 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_08959 | No alias | ethylene-responsive transcription factor rap2-11 | 0.03 | Orthogroups_2024-Update | |
Glyma.01G225000 | No alias | Integrase-type DNA-binding superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.06G064000 | No alias | Integrase-type DNA-binding superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.08G261500 | No alias | Integrase-type DNA-binding superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.12G197700 | No alias | Integrase-type DNA-binding superfamily protein | 0.03 | Orthogroups_2024-Update | |
LOC_Os04g18650 | No alias | AP2 domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
Potri.005G077300 | No alias | related to AP2 4 | 0.03 | Orthogroups_2024-Update | |
Pp1s37_293V6 | No alias | ap2 erf domain-containing transcription factor | 0.02 | Orthogroups_2024-Update | |
Sobic.001G039800.1 | No alias | transcription factor *(CRF) & subgroup ERF-VI... | 0.03 | Orthogroups_2024-Update | |
Sopen07g027720 | No alias | AP2 domain | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | 16Dec |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Predicted GO |
MF | GO:0004386 | helicase activity | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
BP | GO:0006413 | translational initiation | IEP | Predicted GO |
BP | GO:0006465 | signal peptide processing | IEP | Predicted GO |
MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Predicted GO |
MF | GO:0016462 | pyrophosphatase activity | IEP | Predicted GO |
BP | GO:0016485 | protein processing | IEP | Predicted GO |
MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Predicted GO |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
MF | GO:0016887 | ATPase activity | IEP | Predicted GO |
MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Predicted GO |
CC | GO:0019898 | extrinsic component of membrane | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
MF | GO:0043167 | ion binding | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
BP | GO:0051604 | protein maturation | IEP | Predicted GO |
MF | GO:0061505 | DNA topoisomerase II activity | IEP | Predicted GO |
BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001471 | AP2/ERF_dom | 30 | 79 |
No external refs found! |