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  5. Brara.C01111.1

Brara.C01111.1


Description : MYB-RELATED transcription factor *(MYB-R-R)


Gene families : OG_42_0000088 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C01111.1
Cluster HCAA Clusters: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
At2g38090 No alias Duplicated homeodomain-like superfamily protein... 0.03 Orthogroups_2024-Update
At5g05790 No alias At5g05790 [Source:UniProtKB/TrEMBL;Acc:Q9FFJ9] 0.04 Orthogroups_2024-Update
At5g58900 No alias Homeodomain-like transcriptional regulator... 0.03 Orthogroups_2024-Update
At5g61620 No alias Probable transcription factor At5g61620... 0.04 Orthogroups_2024-Update
Bradi2g42870 No alias myb-like transcription factor family protein 0.02 Orthogroups_2024-Update
Bradi5g26110 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G354800 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G191700 No alias Duplicated homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.17G229800 No alias myb-like transcription factor family protein 0.03 Orthogroups_2024-Update
LOC_Os01g34060 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g04840 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
Mp2g13020.1 No alias transcription factor (MYB-related) 0.02 Orthogroups_2024-Update
Mp4g22430.1 No alias transcription factor (MYB-related) 0.03 Orthogroups_2024-Update
Potri.010G240800 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.5G385300.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Sobic.009G072200.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.04 Orthogroups_2024-Update
Solyc04g005100 No alias Myb-like transcription factor family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen07g014330 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen11g002650 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen12g003730 No alias hypothetical protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0070469 respiratory chain IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 143 188
No external refs found!