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  5. Brara.C02342.1

Brara.C02342.1


Description : zinc cation transporter *(Zn-CDF) & zinc cation transporter *(Zn-CDF)


Gene families : OG_42_0002169 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C02342.1
Cluster HCAA Clusters: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
At2g46800 No alias ZAT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VQA0] 0.03 Orthogroups_2024-Update
Bradi2g38330 No alias Cation efflux family protein 0.03 Orthogroups_2024-Update
PSME_00057031-RA No alias (at2g46800 : 229.0) Encodes a member of the zinc... 0.03 Orthogroups_2024-Update
Sobic.009G029500.3 No alias zinc cation transporter *(Zn-CDF) & zinc cation... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEA 16Dec
MF GO:0008324 cation transmembrane transporter activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
InterPro domains Description Start Stop
IPR002524 Cation_efflux 60 307
No external refs found!