Brara.C04582.1

Description : metabolite transporter *(DTX)

Gene families : OG_42_0000106 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C04582.1
Cluster	HCAA Clusters: Cluster_226

Target	Alias	Description	ECC score	Gene Family Method
Brara.A02640.1	No alias	metabolite transporter *(DTX)	0.03	Orthogroups_2024-Update
GRMZM2G161809	No alias	MATE efflux family protein	0.03	Orthogroups_2024-Update
Glyma.06G318700	No alias	MATE efflux family protein	0.04	Orthogroups_2024-Update
Glyma.13G275400	No alias	MATE efflux family protein	0.03	Orthogroups_2024-Update
HORVU1Hr1G003490.2	No alias	metabolite transporter *(DTX)	0.03	Orthogroups_2024-Update
Kfl00030_0420	kfl00030_0420_v1.1	(at5g52450 : 272.0) MATE efflux family protein;...	0.02	Orthogroups_2024-Update
LOC_Os04g30490	No alias	MATE efflux family protein, putative, expressed	0.02	Orthogroups_2024-Update
Mp4g18470.1	No alias	metabolite transporter (DTX)	0.02	Orthogroups_2024-Update
Mp5g00270.1	No alias	metabolite transporter (DTX)	0.02	Orthogroups_2024-Update
Solyc10g007360	No alias	Protein DETOXIFICATION (AHRD V3.3 *** A5B677_VITVI)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015291	secondary active transmembrane transporter activity	None	Extended
MF	GO:0015297	antiporter activity	IEA	16Dec
CC	GO:0016020	membrane	IEA	16Dec
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEA	16Dec
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	16Dec

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Type	GO Term	Name	Evidence	Source
MF	GO:0003712	transcription coregulator activity	IEP	Predicted GO
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Predicted GO
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Predicted GO
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Predicted GO
BP	GO:0006606	protein import into nucleus	IEP	Predicted GO
BP	GO:0006913	nucleocytoplasmic transport	IEP	Predicted GO
MF	GO:0008199	ferric iron binding	IEP	Predicted GO
BP	GO:0009889	regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0010468	regulation of gene expression	IEP	Predicted GO
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Predicted GO
MF	GO:0015267	channel activity	IEP	Predicted GO
CC	GO:0016592	mediator complex	IEP	Predicted GO
BP	GO:0017038	protein import	IEP	Predicted GO
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0019222	regulation of metabolic process	IEP	Predicted GO
MF	GO:0019842	vitamin binding	IEP	Predicted GO
MF	GO:0022803	passive transmembrane transporter activity	IEP	Predicted GO
MF	GO:0030170	pyridoxal phosphate binding	IEP	Predicted GO
BP	GO:0031323	regulation of cellular metabolic process	IEP	Predicted GO
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Predicted GO
BP	GO:0034504	protein localization to nucleus	IEP	Predicted GO
BP	GO:0051169	nuclear transport	IEP	Predicted GO
BP	GO:0051170	import into nucleus	IEP	Predicted GO
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0051252	regulation of RNA metabolic process	IEP	Predicted GO
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Predicted GO
MF	GO:0061608	nuclear import signal receptor activity	IEP	Predicted GO
MF	GO:0070279	vitamin B6 binding	IEP	Predicted GO
BP	GO:0080090	regulation of primary metabolic process	IEP	Predicted GO
MF	GO:0140104	molecular carrier activity	IEP	Predicted GO
MF	GO:0140142	nucleocytoplasmic carrier activity	IEP	Predicted GO
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predicted GO
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002528	MATE_fam	65	224
IPR002528	MATE_fam	287	446

External Links

No external refs found!

Brara.C04582.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation