Description : GeBP-type transcription factor
Gene families : OG_42_0000688 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000688_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.D00865.1 | |
Cluster | HCAA Clusters: Cluster_308 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.E01379.1 | No alias | GeBP-type transcription factor | 0.04 | Orthogroups_2024-Update | |
HORVU5Hr1G051570.3 | No alias | GeBP-type transcription factor | 0.02 | Orthogroups_2024-Update | |
Solyc01g097890 | No alias | LOW QUALITY:DNA-binding storekeeper protein-related... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003712 | transcription coregulator activity | IEP | Predicted GO |
MF | GO:0003729 | mRNA binding | IEP | Predicted GO |
MF | GO:0005048 | signal sequence binding | IEP | Predicted GO |
MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | Predicted GO |
CC | GO:0005849 | mRNA cleavage factor complex | IEP | Predicted GO |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predicted GO |
BP | GO:0006378 | mRNA polyadenylation | IEP | Predicted GO |
BP | GO:0006621 | protein retention in ER lumen | IEP | Predicted GO |
CC | GO:0016592 | mediator complex | IEP | Predicted GO |
BP | GO:0031123 | RNA 3'-end processing | IEP | Predicted GO |
BP | GO:0031124 | mRNA 3'-end processing | IEP | Predicted GO |
BP | GO:0032507 | maintenance of protein location in cell | IEP | Predicted GO |
MF | GO:0033218 | amide binding | IEP | Predicted GO |
BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Predicted GO |
MF | GO:0042277 | peptide binding | IEP | Predicted GO |
BP | GO:0043631 | RNA polyadenylation | IEP | Predicted GO |
CC | GO:0044428 | nuclear part | IEP | Predicted GO |
CC | GO:0044451 | nucleoplasm part | IEP | Predicted GO |
BP | GO:0045185 | maintenance of protein location | IEP | Predicted GO |
MF | GO:0046923 | ER retention sequence binding | IEP | Predicted GO |
BP | GO:0051235 | maintenance of location | IEP | Predicted GO |
BP | GO:0051651 | maintenance of location in cell | IEP | Predicted GO |
BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007592 | GEBP | 94 | 182 |
No external refs found! |