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  5. Brara.E00825.1

Brara.E00825.1


Description : A1-class (Pepsin) protease


Gene families : OG_42_0000019 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E00825.1
Cluster HCAA Clusters: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
413681 No alias Eukaryotic aspartyl protease family protein 0.03 Orthogroups_2024-Update
Brara.B00999.1 No alias A1-class (Pepsin) protease 0.03 Orthogroups_2024-Update
Brara.J02278.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.03 Orthogroups_2024-Update
Glyma.09G187200 No alias Eukaryotic aspartyl protease family protein 0.03 Orthogroups_2024-Update
MA_51087g0010 No alias (at3g25700 : 232.0) Eukaryotic aspartyl protease family... 0.03 Orthogroups_2024-Update
Mp3g18040.1 No alias pepsin-type protease 0.02 Orthogroups_2024-Update
Mp3g18050.1 No alias pepsin-type protease 0.03 Orthogroups_2024-Update
PSME_00027430-RA No alias (at2g03200 : 374.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
Sobic.010G189700.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.04 Orthogroups_2024-Update
Solyc04g008850 No alias Eukaryotic aspartyl protease family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc05g009680 No alias Eukaryotic aspartyl protease family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR032861 TAXi_N 96 281
IPR032799 TAXi_C 299 450
No external refs found!