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  5. Brara.E01728.1

Brara.E01728.1


Description : KANADI-type transcription factor


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E01728.1
Cluster HCAA Clusters: Cluster_345

Target Alias Description ECC score Gene Family Method Actions
AC234155.1_FG002 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g36710 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G106800 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G213700 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os03g55760 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g51130 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os06g45890 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_8865g0010 No alias (at1g32240 : 147.0) Encodes a member of the KANADI... 0.02 Orthogroups_2024-Update
Potri.003G096300 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G099600 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s226_110V6 No alias dna binding 0.02 Orthogroups_2024-Update
Pp1s60_59V6 No alias myb-cc type transfactor 0.02 Orthogroups_2024-Update
Seita.6G121500.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Seita.9G419000.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006658 phosphatidylserine metabolic process IEP Predicted GO
BP GO:0006659 phosphatidylserine biosynthetic process IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 219 270
No external refs found!