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  5. Brara.F03613.1

Brara.F03613.1


Description : NAC-type transcription factor


Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F03613.1
Cluster HCAA Clusters: Cluster_323

Target Alias Description ECC score Gene Family Method Actions
A4A49_20604 No alias nac domain-containing protein 43 0.04 Orthogroups_2024-Update
At3g15170 No alias CUC1 [Source:UniProtKB/TrEMBL;Acc:A0A178V703] 0.04 Orthogroups_2024-Update
At5g17260 No alias NAC domain-containing protein 86... 0.04 Orthogroups_2024-Update
At5g53950 No alias Protein CUP-SHAPED COTYLEDON 2... 0.04 Orthogroups_2024-Update
Brara.A03888.1 No alias NAC-type transcription factor 0.06 Orthogroups_2024-Update
Brara.E03469.1 No alias NAC-type transcription factor 0.04 Orthogroups_2024-Update
Brara.G01268.1 No alias NAC-type transcription factor 0.04 Orthogroups_2024-Update
Brara.H00001.1 No alias NAC-type transcription factor 0.04 Orthogroups_2024-Update
Brara.I05126.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Brara.J01736.1 No alias NAC-type transcription factor 0.05 Orthogroups_2024-Update
GRMZM5G898290 No alias NAC domain containing protein 80 0.02 Orthogroups_2024-Update
Glyma.09G167400 No alias NAC domain containing protein 57 0.03 Orthogroups_2024-Update
Glyma.17G101500 No alias NAC domain containing protein 100 0.02 Orthogroups_2024-Update
Glyma.17G154100 No alias NAC domain containing protein 71 0.05 Orthogroups_2024-Update
HORVU2Hr1G045580.8 No alias NAC-type transcription factor 0.04 Orthogroups_2024-Update
LOC_Os06g01230 No alias no apical meristem protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g02300 No alias no apical meristem protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g42130 No alias no apical meristem protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00006177-RA No alias (at5g53950 : 292.0) Transcriptional activator of the NAC... 0.03 Orthogroups_2024-Update
Potri.002G005800 No alias NAC (No Apical Meristem) domain transcriptional... 0.04 Orthogroups_2024-Update
Seita.7G124900.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G281900.3 No alias NAC-type transcription factor 0.05 Orthogroups_2024-Update
Solyc07g062840 No alias goblet 0.07 Orthogroups_2024-Update
Solyc08g008660 No alias NAC domain-containing protein, putative (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Sopen08g001990 No alias No apical meristem (NAM) protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0051382 kinetochore assembly IEP Predicted GO
BP GO:0051383 kinetochore organization IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR003441 NAC-dom 7 134
No external refs found!