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  5. Brara.G00170.1

Brara.G00170.1


Description : cytokinin dehydrogenase *(CKX) & EC_1.5 oxidoreductase acting on CH-NH group of donor


Gene families : OG_42_0000398 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000398_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G00170.1
Cluster HCAA Clusters: Cluster_339

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G146644 No alias cytokinin oxidase 5 0.05 Orthogroups_2024-Update
Glyma.12G011400 No alias cytokinin oxidase/dehydrogenase 6 0.03 Orthogroups_2024-Update
Glyma.19G135100 No alias cytokinin oxidase/dehydrogenase 1 0.03 Orthogroups_2024-Update
LOC_Os06g37500 No alias cytokinin dehydrogenase precursor, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00047109-RA No alias (at1g75450 : 583.0) This gene used to be called AtCKX6.... 0.02 Orthogroups_2024-Update
Seita.5G133700.1 No alias cytokinin dehydrogenase *(CKX) & EC_1.5 oxidoreductase... 0.05 Orthogroups_2024-Update
Sobic.003G421100.1 No alias EC_1.5 oxidoreductase acting on CH-NH group of donor &... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009690 cytokinin metabolic process IEA 16Dec
MF GO:0019139 cytokinin dehydrogenase activity IEA 16Dec
MF GO:0050660 flavin adenine dinucleotide binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 63 201
IPR015345 Cytokinin_DH_FAD/cytokin-bd 233 505
No external refs found!