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  5. Brara.G02517.1

Brara.G02517.1


Description : transcription factor *(CRF) & subgroup ERF-VI transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G02517.1
Cluster HCAA Clusters: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
A4A49_18156 No alias ethylene-responsive transcription factor shine 3 0.03 Orthogroups_2024-Update
At5g61590 No alias Ethylene-responsive transcription factor ERF107... 0.03 Orthogroups_2024-Update
Glyma.06G125100 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
Glyma.18G018200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os08g43210 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.010G125600 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Pp1s487_24V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Sobic.005G014800.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.02 Orthogroups_2024-Update
Sopen03g024350 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen03g024430 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen04g027740 No alias AP2 domain 0.04 Orthogroups_2024-Update
Sopen05g030580 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen12g022660 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016972 thiol oxidase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 116 165
No external refs found!