Brara.H00623.1

Description : Nodulin-26-like intrinsic protein *(NIP)

Gene families : OG_42_0000209 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.H00623.1
Cluster	HCAA Clusters: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
A4A49_22904	No alias	aquaporin nip1-1	0.03	Orthogroups_2024-Update
Bradi1g38160	No alias	NOD26-like intrinsic protein 1;2	0.04	Orthogroups_2024-Update
LOC_Os06g12310	No alias	aquaporin protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os10g36924	No alias	aquaporin protein, putative, expressed	0.03	Orthogroups_2024-Update
MA_60111g0010	No alias	(at1g80760 : 264.0) Encodes a protein with boron...	0.03	Orthogroups_2024-Update
PSME_00005256-RA	No alias	(at5g37820 : 126.0) NOD26-like intrinsic protein 4;2...	0.03	Orthogroups_2024-Update
PSME_00013963-RA	No alias	(at4g18910 : 276.0) Encodes an aquaporin homolog....	0.02	Orthogroups_2024-Update
PSME_00043726-RA	No alias	(at1g80760 : 300.0) Encodes a protein with boron...	0.03	Orthogroups_2024-Update
PSME_00044314-RA	No alias	(at5g37820 : 133.0) NOD26-like intrinsic protein 4;2...	0.03	Orthogroups_2024-Update
Potri.001G455000	No alias	NOD26-like intrinsic protein 5;1	0.03	Orthogroups_2024-Update
Solyc05g008080	No alias	NOD26-like intrinsic protein 4.2	0.04	Orthogroups_2024-Update
Solyc12g057050	No alias	NOD26-like intrinsic protein 3.2	0.02	Orthogroups_2024-Update
Sopen03g001980	No alias	Major intrinsic protein	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015267	channel activity	IEA	16Dec
CC	GO:0016020	membrane	IEA	16Dec
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	16Dec

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	IEP	Predicted GO
CC	GO:0000124	SAGA complex	IEP	Predicted GO
MF	GO:0003712	transcription coregulator activity	IEP	Predicted GO
MF	GO:0003713	transcription coactivator activity	IEP	Predicted GO
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEP	Predicted GO
CC	GO:0005643	nuclear pore	IEP	Predicted GO
CC	GO:0005778	peroxisomal membrane	IEP	Predicted GO
BP	GO:0006405	RNA export from nucleus	IEP	Predicted GO
BP	GO:0006406	mRNA export from nucleus	IEP	Predicted GO
BP	GO:0006887	exocytosis	IEP	Predicted GO
BP	GO:0006913	nucleocytoplasmic transport	IEP	Predicted GO
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0009893	positive regulation of metabolic process	IEP	Predicted GO
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0010628	positive regulation of gene expression	IEP	Predicted GO
BP	GO:0015931	nucleobase-containing compound transport	IEP	Predicted GO
BP	GO:0016559	peroxisome fission	IEP	Predicted GO
CC	GO:0031248	protein acetyltransferase complex	IEP	Predicted GO
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Predicted GO
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Predicted GO
CC	GO:0031903	microbody membrane	IEP	Predicted GO
CC	GO:0042579	microbody	IEP	Predicted GO
CC	GO:0044438	microbody part	IEP	Predicted GO
CC	GO:0044439	peroxisomal part	IEP	Predicted GO
BP	GO:0045893	positive regulation of transcription, DNA-templated	IEP	Predicted GO
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0048285	organelle fission	IEP	Predicted GO
BP	GO:0048518	positive regulation of biological process	IEP	Predicted GO
BP	GO:0048522	positive regulation of cellular process	IEP	Predicted GO
BP	GO:0050657	nucleic acid transport	IEP	Predicted GO
BP	GO:0050658	RNA transport	IEP	Predicted GO
BP	GO:0051028	mRNA transport	IEP	Predicted GO
BP	GO:0051168	nuclear export	IEP	Predicted GO
BP	GO:0051169	nuclear transport	IEP	Predicted GO
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0051236	establishment of RNA localization	IEP	Predicted GO
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	Predicted GO
CC	GO:0070461	SAGA-type complex	IEP	Predicted GO
CC	GO:0098588	bounding membrane of organelle	IEP	Predicted GO
CC	GO:0098805	whole membrane	IEP	Predicted GO
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	Predicted GO
CC	GO:1902493	acetyltransferase complex	IEP	Predicted GO
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	Predicted GO
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	Predicted GO
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	Predicted GO
CC	GO:1905368	peptidase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000425	MIP	37	256

External Links

No external refs found!

Brara.H00623.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation