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  5. Brara.H00651.1

Brara.H00651.1


Description : component *(PsbX) of PS-II complex


Gene families : OG_42_0003584 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00651.1
Cluster HCAA Clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
A4A49_00335 No alias hypothetical protein 0.05 Orthogroups_2024-Update
A4A49_04481 No alias hypothetical protein 0.05 Orthogroups_2024-Update
Brara.G00467.1 No alias component *(PsbX) of PS-II complex 0.05 Orthogroups_2024-Update
Glyma.04G055300 No alias photosystem II subunit X 0.05 Orthogroups_2024-Update
Glyma.06G055500 No alias photosystem II subunit X 0.07 Orthogroups_2024-Update
Glyma.09G067700 No alias photosystem II subunit X 0.06 Orthogroups_2024-Update
Glyma.09G073900 No alias photosystem II subunit X 0.05 Orthogroups_2024-Update
Glyma.15G174200 No alias photosystem II subunit X 0.04 Orthogroups_2024-Update
Kfl00682_0050 kfl00682_0050_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
LOC_Os03g22370 No alias ultraviolet-B-repressible protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_59693g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.006G222300 No alias photosystem II subunit X 0.03 Orthogroups_2024-Update
Pp1s116_110V6 No alias ultraviolet-b-repressible protein 0.07 Orthogroups_2024-Update
Pp1s249_53V6 No alias ultraviolet-b-repressible protein 0.05 Orthogroups_2024-Update
Pp1s307_12V6 No alias ultraviolet-b-repressible protein 0.05 Orthogroups_2024-Update
Seita.2G429000.1 No alias component *(PsbX) of PS-II complex 0.08 Orthogroups_2024-Update
Sobic.002G414400.1 No alias component *(PsbX) of PS-II complex 0.07 Orthogroups_2024-Update
Sobic.003G055300.1 No alias component *(PsbX) of PS-II complex 0.04 Orthogroups_2024-Update
Solyc05g025600 No alias LOW QUALITY:Photosystem II subunit X (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Sopen05g020200 No alias Photosystem II reaction centre X protein (PsbX) 0.05 Orthogroups_2024-Update
Sopen12g004000 No alias Photosystem II reaction centre X protein (PsbX) 0.05 Orthogroups_2024-Update
Sopen12g004010 No alias Photosystem II reaction centre X protein (PsbX) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA 16Dec
BP GO:0015979 photosynthesis IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR009518 PSII_PsbX 112 148
No external refs found!