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  5. Brara.H00805.1

Brara.H00805.1


Description : calcium-permeable channel *(OSCA)


Gene families : OG_42_0000192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00805.1
Cluster HCAA Clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
41460 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 Orthogroups_2024-Update
A4A49_09861 No alias csc1-like protein rxw8 0.04 Orthogroups_2024-Update
Bradi1g58380 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 Orthogroups_2024-Update
Brara.A01995.1 No alias calcium-permeable channel *(OSCA) 0.1 Orthogroups_2024-Update
Brara.H00598.1 No alias calcium-permeable channel *(OSCA) 0.05 Orthogroups_2024-Update
GRMZM2G049368 No alias Early-responsive to dehydration stress protein (ERD4) 0.04 Orthogroups_2024-Update
GRMZM2G164470 No alias lipases;hydrolases, acting on ester bonds 0.03 Orthogroups_2024-Update
GRMZM2G402708 No alias Early-responsive to dehydration stress protein (ERD4) 0.01 Orthogroups_2024-Update
GRMZM6G732597 No alias Early-responsive to dehydration stress protein (ERD4) 0.04 Orthogroups_2024-Update
Glyma.07G263300 No alias ERD (early-responsive to dehydration stress) family protein 0.05 Orthogroups_2024-Update
Glyma.17G232235 No alias lipases;hydrolases, acting on ester bonds 0.04 Orthogroups_2024-Update
Glyma.20G066800 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G004230.1 No alias calcium-permeable channel *(OSCA) 0.04 Orthogroups_2024-Update
HORVU4Hr1G003420.5 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Kfl00319_0100 kfl00319_0100_v1.1 (at1g11960 : 547.0) ERD (early-responsive to dehydration... 0.02 Orthogroups_2024-Update
LOC_Os05g51630 No alias early-responsive to dehydration protein-related,... 0.02 Orthogroups_2024-Update
LOC_Os12g39320 No alias DUF221 domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10435227g0010 No alias (at4g02900 : 534.0) ERD (early-responsive to dehydration... 0.02 Orthogroups_2024-Update
Pp1s127_53V6 No alias early-responsive to dehydration erd 0.03 Orthogroups_2024-Update
Pp1s78_98V6 No alias early-responsive to dehydrationexpressed 0.02 Orthogroups_2024-Update
Pp1s86_71V6 No alias early responsive to dehydration protein 0.03 Orthogroups_2024-Update
Pp1s96_240V6 No alias early responsive to dehydration protein 0.02 Orthogroups_2024-Update
Seita.3G120200.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Seita.3G403000.1 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
Sobic.008G187100.1 No alias calcium-permeable channel *(OSCA) 0.05 Orthogroups_2024-Update
Solyc12g088230 No alias mitochondrial malate dehydrogenase 0.05 Orthogroups_2024-Update
Sopen12g030230 No alias Domain of unknown function DUF221 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006090 pyruvate metabolic process IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR032880 Csc1_N 7 179
IPR003864 RSN1_7TM 373 645
IPR027815 PHM7_cyt 200 362
No external refs found!