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  5. Brara.H01105.1

Brara.H01105.1


Description : component *(SHL/EBS) of PRC1 complex


Gene families : OG_42_0001066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001066_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H01105.1
Cluster HCAA Clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
PSME_00050748-RA No alias (at4g22140 : 212.0) EARLY BOLTING IN SHORT DAYS (EBS);... 0.02 Orthogroups_2024-Update
Pp1s384_37V6 No alias ebs-bah-phd domain-containing protein 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0005778 peroxisomal membrane IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016255 attachment of GPI anchor to protein IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
BP GO:0018196 peptidyl-asparagine modification IEP Predicted GO
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031903 microbody membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
CC GO:0034998 oligosaccharyltransferase I complex IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 148 196
IPR001025 BAH_dom 31 143
No external refs found!