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  5. Brara.H02030.1

Brara.H02030.1


Description : P2B-type calcium cation-transporting ATPase *(ACA)


Gene families : OG_42_0000196 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H02030.1
Cluster HCAA Clusters: Cluster_340

Target Alias Description ECC score Gene Family Method Actions
A4A49_23243 No alias calcium-transporting atpase 9, plasma membrane-type 0.02 Orthogroups_2024-Update
GRMZM2G305159 No alias autoinhibited Ca(2+)-ATPase, isoform 4 0.03 Orthogroups_2024-Update
LOC_Os03g42020 No alias calcium-transporting ATPase, plasma membrane-type,... 0.02 Orthogroups_2024-Update
Mp3g13160.1 No alias P2B-type calcium cation-transporting ATPase (ACA) 0.02 Orthogroups_2024-Update
Seita.3G193100.1 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.02 Orthogroups_2024-Update
Sobic.007G200500.1 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.03 Orthogroups_2024-Update
evm.model.tig00020607.2 No alias (q6atv4|aca2_orysa : 291.0) Calcium-transporting ATPase... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005049 nuclear export signal receptor activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
CC GO:0070939 Dsl1/NZR complex IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004014 ATPase_P-typ_cation-transptr_N 119 186
IPR024750 Ca_ATPase_N_dom 5 50
IPR006068 ATPase_P-typ_cation-transptr_C 841 1012
No external refs found!