Description : histone *(H2B)
Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.I03652.1 | |
Cluster | HCAA Clusters: Cluster_38 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_60323 | No alias | putative histone h2b.1 | 0.03 | Orthogroups_2024-Update | |
At3g09480 | No alias | Histone H2B [Source:UniProtKB/TrEMBL;Acc:A0A178V4X7] | 0.03 | Orthogroups_2024-Update | |
At3g46030 | No alias | Histone H2B [Source:UniProtKB/TrEMBL;Acc:A0A178VGU6] | 0.04 | Orthogroups_2024-Update | |
At5g22880 | No alias | Histone H2B [Source:UniProtKB/TrEMBL;Acc:Q1H5F7] | 0.03 | Orthogroups_2024-Update | |
Cre06.g264800 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre06.g264900 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre06.g268250 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre06.g273850 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre06.g274250 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre06.g274750 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre06.g276550 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre06.g276900 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre12.g504550 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre12.g504700 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Cre12.g505600 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre12.g506200 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Cre13.g570050 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Cre17.g708600 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Cre17.g711750 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G046841 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G141432 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G305027 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G306258 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G401147 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G472696 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.10G198500 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.11G141600 | No alias | Histone superfamily protein | 0.06 | Orthogroups_2024-Update | |
Glyma.11G141800 | No alias | Histone superfamily protein | 0.06 | Orthogroups_2024-Update | |
Glyma.11G142100 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.12G065100 | No alias | Histone superfamily protein | 0.05 | Orthogroups_2024-Update | |
Glyma.12G065400 | No alias | Histone superfamily protein | 0.05 | Orthogroups_2024-Update | |
Glyma.13G132100 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.13G321600 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.19G173400 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.20G191600 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
HORVU1Hr1G058440.4 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
HORVU1Hr1G066130.1 | No alias | histone *(H2B) | 0.04 | Orthogroups_2024-Update | |
HORVU1Hr1G078480.6 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
HORVU1Hr1G085540.1 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G013530.1 | No alias | histone *(H2B) | 0.06 | Orthogroups_2024-Update | |
HORVU3Hr1G013680.1 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
HORVU4Hr1G009040.2 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
Kfl01110_0020 | kfl01110_0020_v1.... | (p16868|h2b4_volca : 167.0) Histone H2B.4 (H2B-IV) -... | 0.02 | Orthogroups_2024-Update | |
MA_17795g0010 | No alias | (o22582|h2b_goshi : 174.0) Histone H2B - Gossypium... | 0.03 | Orthogroups_2024-Update | |
Mp4g13450.1 | No alias | histone (H2B) | 0.02 | Orthogroups_2024-Update | |
Mp6g07010.1 | No alias | histone (H2B) | 0.03 | Orthogroups_2024-Update | |
Seita.2G294900.1 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
Sobic.007G149600.1 | No alias | histone *(H2B) | 0.02 | Orthogroups_2024-Update | |
Solyc02g038690 | No alias | Histone H2B (AHRD V3.3 *** K4B5W3_SOLLC) | 0.07 | Orthogroups_2024-Update | |
Solyc03g071620 | No alias | Histone H2B (AHRD V3.3 *** K4BHJ2_SOLLC) | 0.04 | Orthogroups_2024-Update | |
Solyc05g055440 | No alias | Histone H2B (AHRD V3.3 *** K4C2M0_SOLLC) | 0.04 | Orthogroups_2024-Update | |
Solyc06g005390 | No alias | Histone H2B (AHRD V3.3 *** K4C323_SOLLC) | 0.08 | Orthogroups_2024-Update | |
Solyc06g074780 | No alias | Histone H2B (AHRD V3.3 *** K4C9J5_SOLLC) | 0.07 | Orthogroups_2024-Update | |
Solyc06g074790 | No alias | Histone H2B (AHRD V3.3 *** M1AAN4_SOLTU) | 0.07 | Orthogroups_2024-Update | |
Solyc06g075800 | No alias | Histone H2B (AHRD V3.3 *** K4C9U5_SOLLC) | 0.08 | Orthogroups_2024-Update | |
Solyc11g007920 | No alias | Histone H2B (AHRD V3.3 *** K4D553_SOLLC) | 0.1 | Orthogroups_2024-Update | |
Solyc11g007930 | No alias | Histone H2B (AHRD V3.3 *** K4D554_SOLLC) | 0.08 | Orthogroups_2024-Update | |
Solyc11g066430 | No alias | histone H2B | 0.09 | Orthogroups_2024-Update | |
Sopen03g019890 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
Sopen05g033890 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
Sopen06g031230 | No alias | Core histone H2A/H2B/H3/H4 | 0.05 | Orthogroups_2024-Update | |
Sopen06g032230 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
Sopen11g003790 | No alias | Core histone H2A/H2B/H3/H4 | 0.04 | Orthogroups_2024-Update | |
Sopen11g003800 | No alias | Core histone H2A/H2B/H3/H4 | 0.12 | Orthogroups_2024-Update | |
Sopen11g026180 | No alias | Core histone H2A/H2B/H3/H4 | 0.05 | Orthogroups_2024-Update | |
Sopen12g006850 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
evm.model.tig00000944.18 | No alias | (p16868|h2b4_volca : 122.0) Histone H2B.4 (H2B-IV) -... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000105 | histidine biosynthetic process | IEP | Predicted GO |
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
CC | GO:0000275 | mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) | IEP | Predicted GO |
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
MF | GO:0003774 | motor activity | IEP | Predicted GO |
MF | GO:0003777 | microtubule motor activity | IEP | Predicted GO |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Predicted GO |
MF | GO:0004635 | phosphoribosyl-AMP cyclohydrolase activity | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
BP | GO:0006547 | histidine metabolic process | IEP | Predicted GO |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0006928 | movement of cell or subcellular component | IEP | Predicted GO |
BP | GO:0007017 | microtubule-based process | IEP | Predicted GO |
BP | GO:0007018 | microtubule-based movement | IEP | Predicted GO |
MF | GO:0008017 | microtubule binding | IEP | Predicted GO |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
BP | GO:0008152 | metabolic process | IEP | Predicted GO |
BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Predicted GO |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Predicted GO |
BP | GO:0009987 | cellular process | IEP | Predicted GO |
MF | GO:0015631 | tubulin binding | IEP | Predicted GO |
BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Predicted GO |
BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Predicted GO |
MF | GO:0016462 | pyrophosphatase activity | IEP | Predicted GO |
MF | GO:0016787 | hydrolase activity | IEP | Predicted GO |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Predicted GO |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Predicted GO |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
MF | GO:0016887 | ATPase activity | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Predicted GO |
MF | GO:0019238 | cyclohydrolase activity | IEP | Predicted GO |
BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
MF | GO:0042623 | ATPase activity, coupled | IEP | Predicted GO |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
CC | GO:0044455 | mitochondrial membrane part | IEP | Predicted GO |
CC | GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | IEP | Predicted GO |
MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | Predicted GO |
BP | GO:0052803 | imidazole-containing compound metabolic process | IEP | Predicted GO |
MF | GO:0061505 | DNA topoisomerase II activity | IEP | Predicted GO |
BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007125 | Histone_H2A/H2B/H3 | 6 | 114 |
No external refs found! |