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  5. Brara.I05274.1

Brara.I05274.1


Description : endoribonuclease *(CSP41)


Gene families : OG_42_0003865 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003865_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.I05274.1
Cluster HCAA Clusters: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Bradi4g08030 No alias chloroplast RNA binding 0.02 Orthogroups_2024-Update
Glyma.19G227700 No alias chloroplast RNA binding 0.03 Orthogroups_2024-Update
Pp1s71_283V6 No alias nad-dependent epimerase dehydratase 0.03 Orthogroups_2024-Update
Sobic.008G066100.1 No alias endoribonuclease *(CSP41) 0.02 Orthogroups_2024-Update
Sopen06g029620 No alias NAD dependent epimerase/dehydratase family 0.04 Orthogroups_2024-Update
evm.model.contig_3495.2 No alias (at1g09340 : 335.0) Encodes CHLOROPLAST RNA BINDING... 0.02 Orthogroups_2024-Update
evm.model.tig00021181.14 No alias (at1g09340 : 348.0) Encodes CHLOROPLAST RNA BINDING... 0.02 Orthogroups_2024-Update
evm.model.tig00021720.14 No alias (at1g09340 : 242.0) Encodes CHLOROPLAST RNA BINDING... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!