1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU1Hr1G073840.1

HORVU1Hr1G073840.1


Description : ferredoxin targeted to NADP reduction


Gene families : OG_42_0000516 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000516_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G073840.1
Cluster HCAA Clusters: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
Brara.H02735.1 No alias ferredoxin targeted to NADP reduction 0.03 Orthogroups_2024-Update
Sobic.009G154700.1 No alias ferredoxin targeted to NADP reduction 0.03 Orthogroups_2024-Update
evm.model.tig00000480.73 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000782 telomere cap complex IEP Predicted GO
CC GO:0000783 nuclear telomere cap complex IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:1990879 CST complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 79 152
No external refs found!