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  5. HORVU3Hr1G086270.3

HORVU3Hr1G086270.3


Description : R1R2R3-MYB transcription factor & MYB class-R2R3 transcription factor


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G086270.3
Cluster HCAA Clusters: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
At2g25230 No alias Myb domain protein 100 [Source:UniProtKB/TrEMBL;Acc:Q9S754] 0.03 Orthogroups_2024-Update
Bradi3g10067 No alias myb domain protein 3r-4 0.02 Orthogroups_2024-Update
Cre09.g399067 No alias myb domain protein 109 0.01 Orthogroups_2024-Update
LOC_Os01g12860 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g62410 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g10130 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
Pp1s120_159V6 No alias myb3r-4 (myb domain protein 3r-4) dna binding... 0.02 Orthogroups_2024-Update
Seita.5G377100.1 No alias R1R2R3-MYB transcription factor & MYB class-R2R3... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 118 164
IPR001005 SANT/Myb 170 213
IPR001005 SANT/Myb 66 112
No external refs found!