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  5. HORVU4Hr1G004090.6

HORVU4Hr1G004090.6


Description : E3 ubiquitin ligase *(UPL6)


Gene families : OG_42_0008592 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008592_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G004090.6
Cluster HCAA Clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
Bradi1g12340 No alias ubiquitin-protein ligase 7 0.03 Orthogroups_2024-Update
Glyma.03G188900 No alias ubiquitin-protein ligase 7 0.03 Orthogroups_2024-Update
Sobic.001G135500.1 No alias E3 ubiquitin ligase *(UPL6) 0.03 Orthogroups_2024-Update
Solyc09g008700 No alias E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A072U2X8_MEDTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000569 HECT_dom 722 1035
No external refs found!