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  5. HORVU6Hr1G076020.5

HORVU6Hr1G076020.5


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase


Gene families : OG_42_0000975 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000975_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G076020.5
Cluster HCAA Clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
A4A49_09994 No alias nep1-interacting protein 1 0.02 Orthogroups_2024-Update
At2g17730 No alias NEP-interacting protein 2 [Source:UniProtKB/TrEMBL;Acc:F4INM3] 0.03 Orthogroups_2024-Update
Glyma.08G316400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.16G121900 No alias NEP-interacting protein 2 0.03 Orthogroups_2024-Update
Solyc03g033330 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061DF87_THECC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!