HORVU6Hr1G087920.7

Description : large subunit gamma of AP-1 trans-Golgi network cargo adaptor complex

Gene families : OG_42_0002482 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002482_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU6Hr1G087920.7
Cluster	HCAA Clusters: Cluster_155

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g48257	No alias	Adaptor protein complex AP-1, gamma subunit	0.02	Orthogroups_2024-Update
Bradi3g54597	No alias	Adaptor protein complex AP-1, gamma subunit	0.03	Orthogroups_2024-Update
Cre16.g676650	No alias	Adaptor protein complex AP-1, gamma subunit	0.02	Orthogroups_2024-Update
Glyma.01G032100	No alias	Adaptor protein complex AP-1, gamma subunit	0.03	Orthogroups_2024-Update
LOC_Os06g07090	No alias	AP-1 complex subunit gamma-1, putative, expressed	0.02	Orthogroups_2024-Update
Pp1s149_72V6	No alias	ap-1 complex subunit gamma-	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	16Dec
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	16Dec
CC	GO:0030117	membrane coat	IEA	16Dec
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	Predicted GO
MF	GO:0003712	transcription coregulator activity	IEP	Predicted GO
MF	GO:0004470	malic enzyme activity	IEP	Predicted GO
MF	GO:0004471	malate dehydrogenase (decarboxylating) (NAD+) activity	IEP	Predicted GO
MF	GO:0004525	ribonuclease III activity	IEP	Predicted GO
CC	GO:0005643	nuclear pore	IEP	Predicted GO
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Predicted GO
BP	GO:0006913	nucleocytoplasmic transport	IEP	Predicted GO
CC	GO:0016592	mediator complex	IEP	Predicted GO
MF	GO:0016615	malate dehydrogenase activity	IEP	Predicted GO
MF	GO:0017056	structural constituent of nuclear pore	IEP	Predicted GO
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	Predicted GO
CC	GO:0044428	nuclear part	IEP	Predicted GO
BP	GO:0051169	nuclear transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002553	Clathrin/coatomer_adapt-like_N	134	687
IPR008152	Clathrin_a/b/g-adaptin_app_Ig	886	1000

External Links

No external refs found!