At3g24290

Description : Putative ammonium transporter 1 member 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK16]

Gene families : OG_42_0001029 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001029_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At3g24290
Cluster	HCCA clusters: Cluster_55

Target	Alias	Description	ECC score	Gene Family Method
Brara.A00853.1	No alias	ammonium transporter *(AMT1)	0.03	Orthogroups_2024-Update
HORVU6Hr1G057870.1	No alias	ammonium transporter *(AMT1)	0.04	Orthogroups_2024-Update
PSME_00056473-RA	No alias	(at1g64780 : 589.0) encodes an ammonium transporter...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
MF	GO:0008519	ammonium transmembrane transporter activity	IEA	InterProScan predictions
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
BP	GO:0015696	ammonium transport	IEA	InterProScan predictions
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Predicted GO
BP	GO:0002097	tRNA wobble base modification	IEP	Predicted GO
BP	GO:0002098	tRNA wobble uridine modification	IEP	Predicted GO
MF	GO:0003712	transcription coregulator activity	IEP	Predicted GO
CC	GO:0005634	nucleus	IEP	Predicted GO
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Predicted GO
BP	GO:0006400	tRNA modification	IEP	Predicted GO
BP	GO:0008033	tRNA processing	IEP	Predicted GO
BP	GO:0009451	RNA modification	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
CC	GO:0016592	mediator complex	IEP	Predicted GO
BP	GO:0034227	tRNA thio-modification	IEP	Predicted GO
CC	GO:0044451	nucleoplasm part	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR024041	NH4_transpt_AmtB-like_dom	49	470

External Links

No external refs found!