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  5. Sobic.001G006700.2

Sobic.001G006700.2


Description : organellar-signalling mediator *(RCD1)


Gene families : OG_42_0000647 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000647_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G006700.2
Cluster HCAA Clusters: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
A4A49_13250 No alias inactive poly [adp-ribose] polymerase rcd1 0.03 Orthogroups_2024-Update
Brara.D02143.1 No alias organellar-signalling mediator *(RCD1) 0.03 Orthogroups_2024-Update
Glyma.01G015200 No alias WWE protein-protein interaction domain protein family 0.01 Orthogroups_2024-Update
Glyma.09G207200 No alias WWE protein-protein interaction domain protein family 0.03 Orthogroups_2024-Update
Potri.018G055100 No alias similar to RCD one 2 0.03 Orthogroups_2024-Update
Pp1s215_49V6 No alias poly polymerase catalytic domain containingexpressed 0.02 Orthogroups_2024-Update
Seita.9G005700.1 No alias organellar-signalling mediator *(RCD1) 0.05 Orthogroups_2024-Update
Seita.9G307500.1 No alias organellar-signalling mediator *(RCD1) 0.03 Orthogroups_2024-Update
Sopen05g001300 No alias RCD1-SRO-TAF4 (RST) plant domain 0.02 Orthogroups_2024-Update
Sopen08g001290 No alias RCD1-SRO-TAF4 (RST) plant domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR022003 RST 488 553
No external refs found!