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  5. Sobic.001G206100.1

Sobic.001G206100.1


Description : cohesin cofactor *(WAPL)


Gene families : OG_42_0004590 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004590_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G206100.1
Cluster HCAA Clusters: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
Bradi3g29910 No alias WAPL (Wings apart-like protein regulation of... 0.03 Orthogroups_2024-Update
Pp1s314_28V6 No alias ac068923_19dentin phosphoryn protein 0.02 Orthogroups_2024-Update
Seita.9G206200.1 No alias cohesin cofactor *(WAPL) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006476 protein deacetylation IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016575 histone deacetylation IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0035601 protein deacylation IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:0098732 macromolecule deacylation IEP Predicted GO
InterPro domains Description Start Stop
IPR022771 WAPL_C 103 698
No external refs found!