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  5. Sobic.001G497300.1

Sobic.001G497300.1


Description : MAP3K-RAF protein kinase & EC_2.7 transferase transferring phosphorus-containing group


Gene families : OG_42_0000595 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000595_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G497300.1
Cluster HCAA Clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Bradi3g08260 No alias Protein kinase superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g27120 No alias Protein kinase superfamily protein 0.05 Orthogroups_2024-Update
Bradi4g38400 No alias Protein kinase superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G165800 No alias Protein kinase superfamily protein 0.02 Orthogroups_2024-Update
Glyma.17G229100 No alias Protein kinase superfamily protein 0.04 Orthogroups_2024-Update
HORVU4Hr1G001850.2 No alias regulatory kinase *(CTR1) of EIN2 signal transducer... 0.05 Orthogroups_2024-Update
Kfl00013_0260 kfl00013_0260_v1.... (at1g73660 : 349.0) Encodes a protein with similarity to... 0.02 Orthogroups_2024-Update
MA_35694g0010 No alias (at5g03730 : 457.0) Homologous to the RAF family of... 0.04 Orthogroups_2024-Update
PSME_00024133-RA No alias (at5g03730 : 314.0) Homologous to the RAF family of... 0.02 Orthogroups_2024-Update
Seita.2G132000.1 No alias regulatory kinase *(CTR1) of EIN2 signal transducer... 0.07 Orthogroups_2024-Update
Sobic.006G210900.4 No alias MAP3K-RAF protein kinase & EC_2.7 transferase... 0.01 Orthogroups_2024-Update
evm.model.tig00000523.22 No alias (at1g18160 : 170.0) Protein kinase superfamily protein;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA 16Dec
BP GO:0006468 protein phosphorylation IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000966 RNA 5'-end processing IEP Predicted GO
BP GO:0001682 tRNA 5'-leader removal IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0007155 cell adhesion IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0022610 biological adhesion IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0030677 ribonuclease P complex IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034471 ncRNA 5'-end processing IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
BP GO:0099116 tRNA 5'-end processing IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
CC GO:1902555 endoribonuclease complex IEP Predicted GO
CC GO:1905348 endonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001245 Ser-Thr/Tyr_kinase_cat_dom 725 976
No external refs found!