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  5. Sobic.001G517500.1

Sobic.001G517500.1


Description : ubiquitin-proteasome shuttle factor *(DSK2)


Gene families : OG_42_0001515 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G517500.1
Cluster HCAA Clusters: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Bradi1g76321 No alias ubiquitin family protein 0.04 Orthogroups_2024-Update
Seita.9G552700.1 No alias ubiquitin-proteasome shuttle factor *(DSK2) 0.03 Orthogroups_2024-Update
Solyc02g082800 No alias Ubiquitin 1, related protein (AHRD V3.3 *** G7K017_MEDTR) 0.02 Orthogroups_2024-Update
evm.model.contig_667.2 No alias (at2g17200 : 216.0) DSK2; CONTAINS InterPro DOMAIN/s:... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0043484 regulation of RNA splicing IEP Predicted GO
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0050684 regulation of mRNA processing IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1903311 regulation of mRNA metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR015940 UBA 496 532
IPR000626 Ubiquitin_dom 22 88
No external refs found!