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  5. Sobic.002G206100.1

Sobic.002G206100.1


Description : A1-class (Pepsin) protease & EC_3.4 hydrolase acting on peptide bond (peptidase)


Gene families : OG_42_0000019 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G206100.1
Cluster HCAA Clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
A4A49_19440 No alias aspartyl protease family protein 0.02 Orthogroups_2024-Update
Brara.J02282.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.02 Orthogroups_2024-Update
Glyma.15G260700 No alias Eukaryotic aspartyl protease family protein 0.03 Orthogroups_2024-Update
Mp3g18050.1 No alias pepsin-type protease 0.03 Orthogroups_2024-Update
PSME_00027430-RA No alias (at2g03200 : 374.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
PSME_00053525-RA No alias (at2g03200 : 289.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
Pp1s315_1V6 No alias aspartic proteinase nepenthesin-1 0.03 Orthogroups_2024-Update
Pp1s36_5V6 No alias aspartic proteinase nepenthesin-1 0.02 Orthogroups_2024-Update
Seita.1G159600.1 No alias A1-class (Pepsin) protease 0.03 Orthogroups_2024-Update
Seita.2G249200.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.02 Orthogroups_2024-Update
Solyc01g096040 No alias Eukaryotic aspartyl protease family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
InterPro domains Description Start Stop
IPR032799 TAXi_C 355 505
IPR032861 TAXi_N 153 329
No external refs found!