Sobic.005G051200.2

Description : subgroup ERF-X transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.005G051200.2
Cluster	HCAA Clusters: Cluster_190

Target	Alias	Description	ECC score	Gene Family Method
A4A49_21042	No alias	ethylene-responsive transcription factor 4	0.02	Orthogroups_2024-Update
A4A49_23010	No alias	ethylene-responsive transcription factor 2	0.04	Orthogroups_2024-Update
A4A49_24041	No alias	ethylene-responsive transcription factor 1a	0.02	Orthogroups_2024-Update
A4A49_36835	No alias	ethylene-responsive transcription factor 5	0.02	Orthogroups_2024-Update
At2g33710	No alias	Integrase-type DNA-binding superfamily protein...	0.06	Orthogroups_2024-Update
At2g40350	No alias	Integrase-type DNA-binding superfamily protein...	0.03	Orthogroups_2024-Update
At3g23230	No alias	Ethylene-responsive transcription factor ERF098...	0.04	Orthogroups_2024-Update
At3g60490	No alias	Ethylene-responsive transcription factor ERF035...	0.03	Orthogroups_2024-Update
At4g28140	No alias	Ethylene-responsive transcription factor ERF054...	0.03	Orthogroups_2024-Update
Bradi1g36590	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi1g75040	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi2g52370	No alias	erf domain protein 9	0.08	Orthogroups_2024-Update
Bradi3g06562	No alias	ethylene responsive element binding factor 3	0.04	Orthogroups_2024-Update
Bradi3g50490	No alias	ethylene responsive element binding factor 1	0.04	Orthogroups_2024-Update
Bradi5g16450	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Brara.B00844.1	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.02	Orthogroups_2024-Update
Brara.B01460.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.04	Orthogroups_2024-Update
Brara.C00560.1	No alias	subgroup ERF-X transcription factor	0.04	Orthogroups_2024-Update
Brara.C01398.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.02	Orthogroups_2024-Update
Brara.C01790.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Brara.E01243.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Brara.E02619.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.G02403.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Brara.J00758.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Cre06.g275500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G019443	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
GRMZM2G053503	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.02G179500	No alias	AINTEGUMENTA-like 7	0.02	Orthogroups_2024-Update
Glyma.03G159800	No alias	ethylene responsive element binding factor 3	0.05	Orthogroups_2024-Update
Glyma.04G201700	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.06G028300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.06G125100	No alias	cytokinin response factor 4	0.02	Orthogroups_2024-Update
Glyma.06G295300	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.07G027000	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.07G244867	No alias	ethylene-responsive element binding protein	0.06	Orthogroups_2024-Update
Glyma.08G137600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.10G016500	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.10G067000	No alias	C-repeat/DRE binding factor 1	0.02	Orthogroups_2024-Update
Glyma.20G172800	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
HORVU2Hr1G098330.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU4Hr1G000700.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU4Hr1G077360.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU5Hr1G018720.1	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.03	Orthogroups_2024-Update
LOC_Os01g73770	No alias	dehydration-responsive element-binding protein,...	0.02	Orthogroups_2024-Update
LOC_Os02g34260	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os05g36100	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g11860	No alias	ethylene-responsive transcription factor, putative, expressed	0.04	Orthogroups_2024-Update
LOC_Os07g22770	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_10435354g0010	No alias	(at1g19210 : 88.6) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
MA_120531g0010	No alias	(at1g28360 : 97.1) encodes a member of the ERF (ethylene...	0.04	Orthogroups_2024-Update
MA_4032g0010	No alias	(q9sxs8\|erf3_tobac : 85.1) Ethylene-responsive...	0.02	Orthogroups_2024-Update
MA_6305g0010	No alias	(at5g21960 : 127.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_896002g0010	No alias	(at5g11590 : 147.0) encodes a member of the DREB...	0.05	Orthogroups_2024-Update
MA_96512g0020	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
PSME_00005185-RA	No alias	(at4g17500 : 105.0) Encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00007285-RA	No alias	(at5g50080 : 84.0) encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00008897-RA	No alias	(at4g17500 : 88.2) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00037532-RA	No alias	(at5g61890 : 129.0) encodes a member of the ERF...	0.04	Orthogroups_2024-Update
PSME_00037533-RA	No alias	(at5g61890 : 108.0) encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00037661-RA	No alias	(at4g17500 : 149.0) Encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00040934-RA	No alias	(at5g64750 : 100.0) Encodes a putative transcription...	0.02	Orthogroups_2024-Update
PSME_00050917-RA	No alias	(at1g74930 : 122.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00051455-RA	No alias	(at5g21960 : 102.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00052064-RA	No alias	(at5g21960 : 132.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00052454-RA	No alias	no hits & (original description: no original description)	0.07	Orthogroups_2024-Update
PSME_00054473-RA	No alias	(at5g64750 : 103.0) Encodes a putative transcription...	0.02	Orthogroups_2024-Update
PSME_00056166-RA	No alias	(at5g11590 : 103.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Potri.003G081200	No alias	ethylene responsive element binding factor 1	0.02	Orthogroups_2024-Update
Potri.008G186300	No alias	DORNROSCHEN-like	0.02	Orthogroups_2024-Update
Pp1s160_12V6	No alias	ap2 domain transcription factor	0.02	Orthogroups_2024-Update
Pp1s233_111V6	No alias	ap2 erf domain-containing transcription factor	0.05	Orthogroups_2024-Update
Pp1s259_104V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Seita.3G237600.1	No alias	subgroup ERF-II transcription factor *(ERF19/20)	0.05	Orthogroups_2024-Update
Seita.4G092200.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G481300.1	No alias	subgroup ERF-VII transcription factor	0.04	Orthogroups_2024-Update
Sobic.001G481400.1	No alias	transcription factor component *(HRE/RAP2.12) of...	0.02	Orthogroups_2024-Update
Sobic.002G184400.1	No alias	subgroup ERF-I transcription factor	0.04	Orthogroups_2024-Update
Sobic.004G171300.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.004G179900.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Sobic.004G310600.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.009G151600.2	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G089700.1	No alias	subgroup ERF-I transcription factor	0.04	Orthogroups_2024-Update
Solyc03g026270	No alias	CBF	0.02	Orthogroups_2024-Update
Solyc03g124110	No alias	CBF	0.02	Orthogroups_2024-Update
Solyc10g009110	No alias	ethylene response factor F.5	0.02	Orthogroups_2024-Update
Sopen02g022270	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen03g035520	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003712	transcription coregulator activity	IEP	Predicted GO
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Predicted GO
CC	GO:0016592	mediator complex	IEP	Predicted GO
CC	GO:0044428	nuclear part	IEP	Predicted GO
CC	GO:0044451	nucleoplasm part	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	184	233

External Links

No external refs found!

Sobic.005G051200.2

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation