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  5. At3g59940

At3g59940


Description : F-box/kelch-repeat protein SKIP20 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1Y1]


Gene families : OG_42_0000514 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000514_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g59940
Cluster HCCA clusters: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
65366 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 Orthogroups_2024-Update
At2g44130 No alias F-box/kelch-repeat protein At2g44130... 0.04 Orthogroups_2024-Update
Brara.E00403.1 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase *(KFB-PAL) 0.04 Orthogroups_2024-Update
GRMZM2G025783 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 Orthogroups_2024-Update
Mp1g25730.1 No alias Putative F-box/kelch-repeat protein At1g27420... 0.02 Orthogroups_2024-Update
Mp6g10520.1 No alias proteolytic phenylalanine ammonia-lyase regulator (KFB-PAL) 0.02 Orthogroups_2024-Update
Potri.006G196900 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 Orthogroups_2024-Update
Pp1s95_130V6 No alias F6E13.26; kelch repeat-containing F-box family protein... 0.03 Orthogroups_2024-Update
Seita.1G198900.1 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase *(KFB-PAL) 0.03 Orthogroups_2024-Update
Sobic.005G085200.1 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase *(KFB-PAL) 0.02 Orthogroups_2024-Update
Solyc06g066770 No alias Kelch repeat-containing F-box family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003919 FMN adenylyltransferase activity IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006652 Kelch_1 196 241
No external refs found!