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  5. Sobic.006G114200.1

Sobic.006G114200.1


Description : Unknown function


Gene families : OG_42_0000681 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000681_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G114200.1
Cluster HCAA Clusters: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
A4A49_21027 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Brara.E03518.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F03021.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G119975 No alias Heavy metal transport/detoxification superfamily protein 0.06 Orthogroups_2024-Update
GRMZM2G160710 No alias Heavy metal transport/detoxification superfamily protein 0.06 Orthogroups_2024-Update
GRMZM2G169726 No alias Heavy metal transport/detoxification superfamily protein 0.05 Orthogroups_2024-Update
GRMZM5G882364 No alias Copper transport protein family 0.04 Orthogroups_2024-Update
Glyma.09G016400 No alias Copper transport protein family 0.03 Orthogroups_2024-Update
HORVU2Hr1G081590.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g37160 No alias heavy metal transport/detoxification protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g37300 No alias heavy metal associated domain containing protein, expressed 0.05 Orthogroups_2024-Update
Potri.001G378700 No alias Copper transport protein family 0.04 Orthogroups_2024-Update
Potri.006G002000 No alias Copper transport protein family 0.03 Orthogroups_2024-Update
Potri.014G171300 No alias Heavy metal transport/detoxification superfamily protein 0.05 Orthogroups_2024-Update
Seita.7G130800.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Seita.7G130900.1 No alias Unknown function 0.09 Orthogroups_2024-Update
Seita.7G131400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G131600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G131700.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Sobic.004G195800.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!