1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.006G182900.1

Sobic.006G182900.1


Description : Unknown function


Gene families : OG_42_0000991 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000991_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G182900.1
Cluster HCAA Clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Bradi4g28430 No alias Protein of unknown function (DUF810) 0.03 Orthogroups_2024-Update
Bradi5g18697 No alias Protein of unknown function (DUF810) 0.03 Orthogroups_2024-Update
GRMZM2G439950 No alias Protein of unknown function (DUF810) 0.03 Orthogroups_2024-Update
LOC_Os09g17760 No alias expressed protein 0.02 Orthogroups_2024-Update
MA_12587g0010 No alias (at2g25800 : 672.0) CONTAINS InterPro DOMAIN/s: Munc13... 0.03 Orthogroups_2024-Update
Potri.018G085900 No alias Protein of unknown function (DUF810) 0.02 Orthogroups_2024-Update
Solyc05g018180 No alias Mammalian uncoordinated homology 13, domain 2 (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006474 N-terminal protein amino acid acetylation IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP Predicted GO
BP GO:0018206 peptidyl-methionine modification IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0031365 N-terminal protein amino acid modification IEP Predicted GO
CC GO:0031414 N-terminal protein acetyltransferase complex IEP Predicted GO
CC GO:0031417 NatC complex IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!