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  5. Sobic.006G209400.1

Sobic.006G209400.1


Description : clade F phosphatase


Gene families : OG_42_0000194 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G209400.1
Cluster HCAA Clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
At5g10740 No alias Probable protein phosphatase 2C 69... 0.03 Orthogroups_2024-Update
Brara.I04691.1 No alias clade F phosphatase 0.02 Orthogroups_2024-Update
Glyma.12G116800 No alias Protein phosphatase 2C family protein 0.05 Orthogroups_2024-Update
HORVU2Hr1G079200.1 No alias clade F phosphatase 0.04 Orthogroups_2024-Update
LOC_Os02g05630 No alias protein phosphatase 2C, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g37904 No alias protein phosphatase 2C, putative, expressed 0.02 Orthogroups_2024-Update
MA_11564g0010 No alias (at1g22280 : 379.0) Encodes a phytochrome-associated... 0.03 Orthogroups_2024-Update
MA_174291g0010 No alias (at4g28400 : 276.0) Protein phosphatase 2C family... 0.02 Orthogroups_2024-Update
PSME_00042484-RA No alias (at5g53140 : 189.0) Protein phosphatase 2C family... 0.02 Orthogroups_2024-Update
Potri.002G097200 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Potri.005G164600 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Seita.1G088700.1 No alias clade F phosphatase 0.03 Orthogroups_2024-Update
Sopen01g034390 No alias Protein phosphatase 2C 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
BP GO:0000731 DNA synthesis involved in DNA repair IEP Predicted GO
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0071897 DNA biosynthetic process IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 82 312
No external refs found!