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  5. Sobic.007G026000.2

Sobic.007G026000.2


Description : transcriptional co-activator *(BET/GTE)


Gene families : OG_42_0000275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000275_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G026000.2
Cluster HCAA Clusters: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G127299 No alias bromodomain and extraterminal domain protein 9 0.02 Orthogroups_2024-Update
HORVU3Hr1G022660.1 No alias transcriptional co-activator *(BET/GTE) 0.04 Orthogroups_2024-Update
MA_10435152g0020 No alias (at5g63320 : 289.0) Encodes NPX1 (Nuclear Protein X1), a... 0.02 Orthogroups_2024-Update
Potri.001G073800 No alias Transcription factor GTE6 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
InterPro domains Description Start Stop
IPR027353 NET_dom 300 361
IPR001487 Bromodomain 96 179
No external refs found!