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  5. Sobic.009G166300.1

Sobic.009G166300.1


Description : E3 ubiquitin ligase *(UPL3)


Gene families : OG_42_0001466 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001466_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G166300.1
Cluster HCAA Clusters: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
At5g02880 No alias E3 ubiquitin-protein ligase UPL4... 0.03 Orthogroups_2024-Update
Bradi2g22927 No alias ubiquitin-protein ligase 4 0.03 Orthogroups_2024-Update
Cre07.g312900 No alias HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.02 Orthogroups_2024-Update
GRMZM2G374574 No alias HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.03 Orthogroups_2024-Update
Glyma.04G004000 No alias HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.03 Orthogroups_2024-Update
Glyma.10G049100 No alias ubiquitin-protein ligase 4 0.03 Orthogroups_2024-Update
Kfl00965_0030 kfl00965_0030_v1.1 (at4g38600 : 514.0) encodes a member of HECT ubiquitin... 0.01 Orthogroups_2024-Update
Potri.006G132000 No alias ubiquitin-protein ligase 4 0.03 Orthogroups_2024-Update
Potri.016G085200 No alias ubiquitin-protein ligase 4 0.02 Orthogroups_2024-Update
Seita.3G213700.1 No alias E3 ubiquitin ligase *(UPL3) 0.03 Orthogroups_2024-Update
Seita.7G028700.1 No alias E3 ubiquitin ligase *(UPL3) 0.05 Orthogroups_2024-Update
evm.model.tig00020554.36 No alias (at4g38600 : 291.0) encodes a member of HECT ubiquitin... 0.01 Orthogroups_2024-Update
evm.model.tig00020554.37 No alias (at4g38600 : 309.0) encodes a member of HECT ubiquitin... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003725 double-stranded RNA binding IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
BP GO:0032780 negative regulation of ATPase activity IEP Predicted GO
MF GO:0042030 ATPase inhibitor activity IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0043086 negative regulation of catalytic activity IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0043462 regulation of ATPase activity IEP Predicted GO
BP GO:0044092 negative regulation of molecular function IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044599 AP-5 adaptor complex IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
BP GO:0051346 negative regulation of hydrolase activity IEP Predicted GO
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0060090 molecular adaptor activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000569 HECT_dom 1194 1539
No external refs found!