Seita.1G158900.1


Description : Unknown function


Gene families : OG_42_0000864 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G158900.1
Cluster HCAA Clusters: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
82033 No alias pleckstrin homology (PH) domain-containing protein 0.02 Orthogroups_2024-Update
A4A49_14722 No alias hypothetical protein 0.03 Orthogroups_2024-Update
A4A49_38349 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At1g48090 No alias calcium-dependent lipid-binding family protein... 0.03 Orthogroups_2024-Update
Bradi3g43345 No alias calcium-dependent lipid-binding family protein 0.1 Orthogroups_2024-Update
Brara.K01205.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.07G233100 No alias calcium-dependent lipid-binding family protein 0.05 Orthogroups_2024-Update
Glyma.11G039900 No alias pleckstrin homology (PH) domain-containing protein 0.04 Orthogroups_2024-Update
Kfl00451_0090 kfl00451_0090_v1.1 (at1g48090 : 1719.0) calcium-dependent lipid-binding... 0.02 Orthogroups_2024-Update
Potri.008G100600 No alias calcium-dependent lipid-binding family protein 0.03 Orthogroups_2024-Update
Pp1s314_26V6 No alias vacuolar protein sorting-associated 0.03 Orthogroups_2024-Update
Sobic.001G293700.2 No alias Unknown function 0.07 Orthogroups_2024-Update
evm.model.tig00001343.3 No alias (at4g17140 : 125.0) pleckstrin homology (PH)... 0.02 Orthogroups_2024-Update
evm.model.tig00020554.153 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0002790 peptide secretion IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
BP GO:0009306 protein secretion IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000008 C2_dom 2313 2377
IPR031645 VPS13_C 3460 3562
IPR031642 VPS13_mid_rpt 228 453
IPR009543 SHR-BD 2898 3211
IPR009291 Vps62 1632 1796
IPR009291 Vps62 1934 2016
No external refs found!