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  5. Seita.2G129300.1

Seita.2G129300.1


Description : subunit alpha of Cpn60 chaperonin complex & subunit alpha of CPN60 assembly chaperone heterodimer & chaperone *(Hsp60)


Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G129300.1
Cluster HCAA Clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
168153 No alias chaperonin 60 beta 0.04 Orthogroups_2024-Update
405358 No alias heat shock protein 60 0.03 Orthogroups_2024-Update
AC215201.3_FG005 No alias chaperonin-60alpha 0.02 Orthogroups_2024-Update
At3g13860 No alias Chaperonin CPN60-like 2, mitochondrial... 0.04 Orthogroups_2024-Update
Bradi1g50270 No alias chaperonin 60 beta 0.02 Orthogroups_2024-Update
Bradi4g38090 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Bradi5g11240 No alias TCP-1/cpn60 chaperonin family protein 0.04 Orthogroups_2024-Update
Brara.B00789.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.05 Orthogroups_2024-Update
Brara.C01696.1 No alias chaperone *(Hsp60) 0.03 Orthogroups_2024-Update
Brara.C03496.1 No alias chaperone *(Hsp60) 0.05 Orthogroups_2024-Update
Brara.C03936.1 No alias chaperone *(Hsp60) 0.04 Orthogroups_2024-Update
GRMZM2G416120 No alias heat shock protein 60 0.03 Orthogroups_2024-Update
Glyma.01G069500 No alias TCP-1/cpn60 chaperonin family protein 0.04 Orthogroups_2024-Update
Glyma.02G126300 No alias TCP-1/cpn60 chaperonin family protein 0.06 Orthogroups_2024-Update
Glyma.07G009600 No alias heat shock protein 60-3A 0.04 Orthogroups_2024-Update
Glyma.08G192700 No alias heat shock protein 60-3A 0.02 Orthogroups_2024-Update
Glyma.10G127800 No alias heat shock protein 60 0.03 Orthogroups_2024-Update
Glyma.20G079300 No alias heat shock protein 60 0.02 Orthogroups_2024-Update
HORVU0Hr1G038830.19 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.05 Orthogroups_2024-Update
HORVU1Hr1G038680.8 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G007840.7 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.04 Orthogroups_2024-Update
HORVU2Hr1G077410.1 No alias subunit beta of CPN60 assembly chaperone heterodimer &... 0.06 Orthogroups_2024-Update
HORVU7Hr1G006490.2 No alias chaperone *(Hsp60) & subunit beta of CPN60 assembly... 0.03 Orthogroups_2024-Update
Kfl00113_0150 kfl00113_0150_v1.1 (p08926|ruba_pea : 818.0) RuBisCO large subunit-binding... 0.02 Orthogroups_2024-Update
MA_97627g0010 No alias (p08927|rubb_pea : 646.0) RuBisCO large subunit-binding... 0.05 Orthogroups_2024-Update
PSME_00000058-RA No alias (at3g13470 : 709.0) TCP-1/cpn60 chaperonin family... 0.04 Orthogroups_2024-Update
PSME_00000537-RA No alias (p21239|rub1_brana : 764.0) RuBisCO large... 0.04 Orthogroups_2024-Update
PSME_00008710-RA No alias (q05046|ch62_cucma : 823.0) Chaperonin CPN60-2,... 0.02 Orthogroups_2024-Update
PSME_00016110-RA No alias (p08926|ruba_pea : 852.0) RuBisCO large subunit-binding... 0.04 Orthogroups_2024-Update
Sobic.001G228200.1 No alias chaperone *(Hsp60) 0.04 Orthogroups_2024-Update
Sobic.002G131000.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.13 Orthogroups_2024-Update
Sobic.009G214100.1 No alias chaperone *(Hsp60) 0.05 Orthogroups_2024-Update
Solyc02g068730 No alias Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI) 0.05 Orthogroups_2024-Update
Solyc03g120850 No alias Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU) 0.03 Orthogroups_2024-Update
Solyc05g010240 No alias Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU) 0.02 Orthogroups_2024-Update
Solyc09g091180 No alias Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH) 0.04 Orthogroups_2024-Update
Solyc11g069790 No alias Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI) 0.03 Orthogroups_2024-Update
Sopen05g006000 No alias TCP-1/cpn60 chaperonin family 0.04 Orthogroups_2024-Update
Sopen05g031970 No alias TCP-1/cpn60 chaperonin family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006188 IMP biosynthetic process IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Predicted GO
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
CC GO:0034708 methyltransferase complex IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0043527 tRNA methyltransferase complex IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0046040 IMP metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 60 567
No external refs found!