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  5. Seita.2G326000.1

Seita.2G326000.1


Description : transcriptional co-activator *(BET/GTE)


Gene families : OG_42_0000275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000275_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G326000.1
Cluster HCAA Clusters: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
A4A49_35289 No alias transcription factor gte12 0.03 Orthogroups_2024-Update
Bradi3g14160 No alias bromodomain and extraterminal domain protein 9 0.03 Orthogroups_2024-Update
Bradi3g47960 No alias bromodomain and extraterminal domain protein 10 0.03 Orthogroups_2024-Update
Brara.B02908.1 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
Cre08.g367300 No alias DNA-binding bromodomain-containing protein 0.01 Orthogroups_2024-Update
GRMZM2G127299 No alias bromodomain and extraterminal domain protein 9 0.02 Orthogroups_2024-Update
Glyma.12G122100 No alias global transcription factor group E4 0.03 Orthogroups_2024-Update
Glyma.12G209100 No alias global transcription factor group E4 0.04 Orthogroups_2024-Update
LOC_Os07g32420 No alias bromodomain domain containing protein, expressed 0.03 Orthogroups_2024-Update
Mp1g20280.1 No alias transcriptional co-activator (BET/GTE) 0.02 Orthogroups_2024-Update
Sobic.002G313300.1 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
Sobic.003G018900.1 No alias transcriptional co-activator *(BET/GTE) 0.01 Orthogroups_2024-Update
Solyc02g071510 No alias Transcription factor GTE12-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc07g062660 No alias Transcription factor GTE4 (AHRD V3.3 *** A0A0B2R809_GLYSO) 0.02 Orthogroups_2024-Update
evm.model.contig_3458.5 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001487 Bromodomain 13 97
No external refs found!