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At4g17840


Description : At4g17840 [Source:UniProtKB/TrEMBL;Acc:Q0WMZ7]


Gene families : OG_42_0006323 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006323_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g17840
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Bradi1g78710 No alias Function unknown 0.03 Orthogroups_2024-Update
Brara.A00908.1 No alias regulatory protein *(BCM) of chlorophyll homeostasis 0.05 Orthogroups_2024-Update
Brara.E00913.1 No alias regulatory protein *(BCM) of chlorophyll homeostasis 0.05 Orthogroups_2024-Update
Brara.K00482.1 No alias regulatory protein *(BCM) of chlorophyll homeostasis 0.07 Orthogroups_2024-Update
HORVU4Hr1G090380.7 No alias regulatory protein *(BCM) of chlorophyll homeostasis 0.03 Orthogroups_2024-Update
Potri.001G143400 No alias Function unknown 0.05 Orthogroups_2024-Update
Seita.7G166400.1 No alias regulatory protein *(BCM) of chlorophyll homeostasis 0.06 Orthogroups_2024-Update
Sobic.006G147300.1 No alias regulatory protein *(BCM) of chlorophyll homeostasis 0.05 Orthogroups_2024-Update
Solyc08g005010 No alias CAAX protease self-immunity protein (AHRD V3.3 *** AT4G17840.1) 0.05 Orthogroups_2024-Update
Sopen08g001030 No alias CAAX protease self-immunity 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR003675 CAAX_protease 237 389
No external refs found!