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  5. Seita.3G041300.1

Seita.3G041300.1


Description : E3 UFM ubiquitin ligase


Gene families : OG_42_0006898 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006898_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G041300.1
Cluster HCAA Clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
113645 No alias Function unknown 0.03 Orthogroups_2024-Update
At3g46220 No alias E3 UFM1-protein ligase-like protein... 0.04 Orthogroups_2024-Update
Bradi2g37530 No alias Function unknown 0.05 Orthogroups_2024-Update
Glyma.11G145645 No alias Function unknown 0.04 Orthogroups_2024-Update
Glyma.12G074800 No alias Function unknown 0.03 Orthogroups_2024-Update
HORVU1Hr1G007580.4 No alias E3 UFM ubiquitin ligase 0.05 Orthogroups_2024-Update
Solyc11g072950 No alias E3 UFM1-protein ligase 1 (AHRD V3.3 *** A0A103XPK8_CYNCS) 0.04 Orthogroups_2024-Update
evm.model.tig00021582.35 No alias (at3g46220 : 182.0) unknown protein; INVOLVED IN:... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0061666 UFM1 ligase activity IEA 16Dec
BP GO:0071569 protein ufmylation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
MF GO:0060090 molecular adaptor activity IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR018611 E3_UFM1_ligase_1 4 288
No external refs found!